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SRX25140886: 16S metabarcoding of Camponotus floridanus: gut contents from gaster
1 ILLUMINA (Illumina MiSeq) run: 27,600 spots, 15.4M bases, 8.7Mb downloads

Design: Amplicon library preparation using Illumina XT index primers (i5 and i7) following the Illumina 16S Metagenomic Sequencing Library Preparation protocol
Submitted by: University of Central Florida
Study: Gut micro- and mycobiome composition of fungal-infected Florida Carpenter Ants (Camponotus floridanus)
show Abstracthide Abstract
The aim of this study was to assess the impacts of two fungal entomopathogens with different infection strategies on the gut micro- and mycobiota of Camponotus floridanus over time; Ophiocordyceps camponoti-floridani and Beauveria bassiana. Examining the microbiome during infection could offer a better understanding of entomopathogenic infection and manipulation methods and advise biopesticide applications. Furthermore, the mycobiome, despite its significant contribution in gut ecology, is still frequently neglected in microbiome studies. To improve our limited understanding of fungal infections in insects, we sampled fungal-infected ants across the infection period and characterized the gut micro- and mycobiome. We targeted the V4 region of the 16S SSU rRNA gene for bacterial metabarcoding, and the ITS2 region of the internal transcribed spacer (ITS) gene for fungal metabarcoding. Results found that Ophiocordyceps had measurable impacts on the ant host micro- and mycobiome, whereas Beauveria did not. Additionally, ants sampled during Ophiocordyceps-adaptive summiting behavior possessed a significantly different micro- and mycobiome composition when compared the healthy controls and sample timepoints surrounding manipulation. These findings suggest that the host micro- and mycobiome may be involved in the manipulation strategy of Ophiocordyceps.
Sample:
SAMN42148670 • SRS21832839 • All experiments • All runs
Organism: ant metagenome
Library:
Name: bac-ANT-085
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 27,600 spots, 15.4M bases, 8.7Mb
Run# of Spots# of BasesSizePublished
SRR2963489927,60015.4M8.7Mb2024-06-27

ID:
33478958

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